Lista över skärningsställen för restriktionsenzym: A
| Legenden om nukleobaser | |
|---|---|
| Koda | Nukleotid representerad |
| A | Adenin (A) |
| C | Cytosin (C) |
| G | Guanin (G) |
| T | Tymin (T) |
| N | A, C, G eller T |
| M | A eller C |
| R | A eller G |
| W | A eller T |
| Y | C eller T |
| S | C eller G |
| K | G eller T |
| H | A, C eller T |
| B | C, G eller T |
| V | A, C eller G |
| D | A, G eller T |
Den här artikeln innehåller en lista över restriktionsenzymer vars namn börjar med A och har en tydligt definierad skärplats.
Följande information ges för varje enzym:
- Name of Restriction Enzyme : Accepterat namn på molekylen , enligt den internationellt antagna nomenklaturen och bibliografiska referenser . Obs: Vid alfabetisering ordnas enzymer först alfabetiskt efter akronymerna (allt före romerska siffror); sedan ordnas enzymer av en given akronym i alfabetisk ordning efter den romerska siffran, och behandlar siffran som en siffra och inte en sträng av bokstäver. Detta hjälper till att hålla posterna ordnade hierarkiskt samtidigt som de är alfabetiska. (Mer läsning: se avsnittet " Nomenklatur " i artikeln " Restriktionsenzym ".)
- PDB -kod : Kod som används för att identifiera strukturen av ett protein i PDB -databasen över proteinstrukturer. 3D-atomstrukturen hos ett protein ger mycket värdefull information för att förstå de intima detaljerna i dess verkningsmekanism.
- REBASE Number : Nummer som används för att identifiera restriktionsenzymer i REBASE restriktionsenzymdatabasen . Denna databas innehåller viktig information om enzymet såsom igenkänningssekvens , källa och isoschizomerer , såväl som andra data, såsom de kommersiella leverantörerna av enzymet.
- Källa : Organism som naturligt producerar enzymet.
- Igenkänningssekvens : Sekvens av DNA som känns igen av enzymet och till vilken det specifikt binder.
- Klipp : Visar klippplatsen och mönstret och produkterna från klippet. Igenkänningssekvensen och klippstället matchar vanligtvis, men ibland kan klippstället vara dussintals nukleotider bort från igenkänningsstället .
- Isoschizomerer och neoschizomerer : En isoschizomer är ett restriktionsenzym som känner igen samma sekvens som ett annat. En neoschizomer är en speciell typ av isoschizomer som känner igen samma sekvens som en annan, men skär på ett annat sätt. Ett maximalt antal av 8–10 vanligaste isoschizomerer är indikerade för varje enzym men det kan finnas många fler. Neoschizomerer visas med fet och grön typsnitt (t.ex.: BamHI ). När "Ingen per [datum]" anges betyder det att det inte fanns några registrerade isoschizomerer i databaserna det datumet med en tydligt definierad skärplats . Isoschizomerer indikerade med vitt teckensnitt och grå bakgrund motsvarar enzymer som inte finns med i de aktuella listorna, som i detta inte listade enzym: Abc123I
Restriktionsenzymer
A
| Enzym | PDB -kod | REBASE -nummer | Källa | Igenkänningssekvens | Skära | Isoschizomerer |
|---|---|---|---|---|---|---|
| AaaI | 1 | Acetobacter aceti |
5' CGGCCG 3' GCCGGC
|
5' ---C GGCCG--- 3' 3' ---GCCGG C--- 5'
|
BseX3I, BstZI, EagI, EclXI, Eco52I, SenPT16I, XmaIII | |
| AagI | 4 | Achromobacter smidig |
5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
BanIII, BavCI, Bsa29I, BseCI, BspDI, Bsu15I, BsuTUI, ClaI | |
| AanI | 15358 | Arthrobacter aurescens RFL2 |
5' TTATAA 3' AATATT
|
5' ---TTA TAA--- 3' 3' ---AAT ATT--- 5'
|
PsiI, Csp1BORF7380P | |
| AarI | 2892 | Arthrobacter aurescens SS2-322 |
5' CACCTGC 3' GTGGACG
|
5' ---CACCTGCN 3 N NNNN--- 3' 3' ---GTGGACGN 3 NNNNN --- 5'
|
Inga i maj 2010 | |
| AasI | 5465 | Arthrobacter aurescens RFL3 |
5' GACN 6 GTC 3' CTGN 6 CAG
|
5' ---GACNNNN NNGTC--- 3' 3' ---CTGNN NNNNCAG--- 5'
|
DrdI, DseDI | |
| AatI | 6 | Acetobacter aceti |
5' AGGCCT 3' TCCGGA
|
5' ---AGG CCT--- 3' 3' ---TCC GGA--- 5'
|
AspMI, Eco147I, Eco1524I, Pcel, Pme55I, SarI, Sru30DI, SteI | |
| AatII | 7 | Acetobacter aceti |
5' GACGTC 3' CTGCAG
|
5' ---GACGT C--- 3' 3' ---C TGCAG--- 5'
|
Ssp5230I, ZraI | |
| AauI | 3010 | Arthrobacter aurescens |
5' TGTACA 3' ACATGT
|
5' ---T GTACA--- 3' 3' ---ACATG T--- 5'
|
BsmRI, Bsp1407I, BsrGI, BstAUI, Ssp4800I, SspBI | |
| AbaI | 3029 | Azospirillum brasilense UQ 1796 |
5' TGATCA 3' ACTAGT
|
5' ---T GATCA--- 3' 3' ---ACTAG T--- 5'
|
BclI, BsiQI, BspXII, BstT7I, Fbal, Ksp22I, ParI | |
| AbeI | 3097 | Azotobacter beijerinckii Slo 54-028 |
5' CCTCAGC 3' GGAGTCG
|
5' ---CC TCAGC--- 3' 3' ---GGAGT CG--- 5'
|
BbvCI | |
| AbrI | 8 | Azospirillum brasilense |
5' CTCGAG 3' GAGCTC
|
5' ---C TCGAG--- 3' 3' ---GAGCT C--- 5'
|
BluI, BspAAI, BssHI, EscI, PaeR7I, SciI , Sfr274I, Sol10179I, StrI, TliI | |
| AbsI | 14594 | Arthrobacter sp. 7M06 |
5' CCTCGAGG 3' GGAGCTCC
|
5' ---CC TCGAGG--- 3' 3' ---GGAGCT CC--- 5'
|
Inga den 4 april 2019 | |
| AccI | 18 | Acinetobacter calcoaceticus |
5' GTMKAC 3' CAKMTG
|
5' ---GT MKAC--- 3' 3' ---CAKM TG--- 5'
|
FblI, XmiI | |
| AccII | 19 | Acinetobacter calcoaceticus |
5' CGCG 3' GCGC
|
5' ---CG CG--- 3' 3' ---GC GC--- 5'
|
Bsh1236I, Bsp50I, BstFNI, BstUI, MvnI, SelI , BceBI, BepI, Bpu95I | |
| AccIII | 20 | Acinetobacter calcoaceticus |
5' TCCGGA 3' AGGCCT
|
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5'
|
Aor13HI, BbvAIII, BlfI, BseAI, BsiMI, BspEI, CauB3I, Kpn2I, MroI, Ptal | |
| Acc16I | 2638 | Acinetobacter calcoaceticus 16 |
5' TGCGCA 3' ACGCGT
|
5' ---TGC GCA--- 3' 3' ---ACG CGT--- 5'
|
AosI, AviII, FdII, FspI, MstI, NsbI, PamI, Pun14627I | |
| Acc36I | 4162 | Acinetobacter calcoaceticus 36 |
5' ACCTGC 3' TGGACG
|
5' ---ACCTGCN 3 N NNNN--- 3' 3' ---TGGACGN 3 NNNNN --- 5'
|
BfuAI, BspMI, Bvel | |
| Acc65I | 14 | Acinetobacter calcoaceticus 65 |
5' GGTACC 3' CCATGG
|
5' ---G GTACC--- 3' 3' ---CCATG G--- 5'
|
AhaB8I, Asp718I, Kpnl , SthI | |
| Acc113I | 2665 | Acinetobacter calcoaceticus 113 |
5' AGTACT 3' TCATGA
|
5' ---AGT ACT--- 3' 3' ---TCA TGA--- 5'
|
AssI, BmcAI, Bpa34I, DpaI, Eco255I, RflFII, ScaI, ZrmI | |
| AccB1I | 15 | Acinetobacter calcoaceticus B1 |
5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
BanI, BbvBI, BshNI, BspT107I, Eco64I, HgiCI, HgiHI, MspB4I | |
| AccB2I | 2666 | Acinetobacter calcoaceticus B2 |
5' RGCGCY 3' YCGCGR
|
5' ---RGCGC Y--- 3' 3' ---Y CGCGR--- 5'
|
BfoI, Bme142I , Bsp143II, BstH2I, HaeII, LpnI | |
| AccB7I | 16 | Acinetobacter calcoaceticus B7 |
5' CCAN 5 TGG 3' GGTN 5 ACC
|
5' ---CCANNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AcpII, Asp10HII, BasI, Esp1396I, PflBI, PflMI, Van91I | |
| AccBSI | 2733 | Acinetobacter calcoaceticus BS |
5' CCGCTC 3' GGCGAG
|
5' ---CCG CTC--- 3' 3' ---GGC GAG--- 5'
|
BsrBI, BstD102I, Bst31NI, MbiI | |
| AccEBI | 17 | Acinetobacter calcoaceticus EBF 65/65 |
5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
AsiI, BamHI , Bce751I, Bsp98I, BspAAIII, CelI, OkrAI, Uba4009I | |
| AceI | 2571 | Anabaena cedrorum |
5' GCWGC 3' CGWCG
|
5' ---G CWGC--- 3' 3' ---CGWC G--- 5'
|
ApeKI, SuiI, Taq52I, Tsel | |
| AceII | 2570 | Anabaena cedrorum |
5' GCTAGC 3' CGATCG
|
5' ---GCTAG C--- 3' 3' ---C GATCG--- 5'
|
AsuNHI , BmtI, BspOI, , LlaG2I , NheI , PstNHI | |
| AceIII | 2569 | Anabaena cedrorum |
5' CAGCTC 3' GTCGAG
|
5' ---CAGCTCN 5 N NNNN--- 3' 3' ---GTCGAGN 5 NNNNN --- 5'
|
— Inga i maj 2010 — | |
| AciI | 21 | Arthrobacter citreus |
5' CCGC 3' GGCG
|
5' ---C CGC--- 3' 3' ---GGC G--- 5'
|
SsiI | |
| Accl | 2181 | Acinetobacter calcoaceticus M4 |
5' AACGTT 3' TTGCAA
|
5' ---AA CGTT--- 3' 3' ---TTGC AA--- 5'
|
Psp1406I | |
| AclNI | 2667 | Acinetobacter calcoaceticus N20 |
5' ACTAGT 3' TGATCA
|
5' ---A CTAGT--- 3' 3' ---TGATC A--- 5'
|
AhlI, BcuI, Spel | |
| AclWI | 2668 | Acinetobacter calcoaceticus W2131 |
5' GGATC 3' CCTAG
|
5' ---GGATCN 3 N N--- 3' 3' ---CCTAGN 3 NN --- 5'
|
AlwI, BinI, BpuFI, BsrWI, BspPI, BstH9I, Bst31TI, EacI, Ral8I | |
| AcoI | 11822 | Acinetobacter calcoaceticus |
5' YGGCCR 3' RCCGGY
|
5' ---Y GGCCR--- 3' 3' ---RCCGG Y--- 5'
|
EaeI, Bfi89I, CfrI, EcoHK31I | |
| Acpl | 22 | Acidiphilium cryptum 25H |
5' TTCGAA 3' AAGCTT
|
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5'
|
Asp10HI, Bpu14I, Bsp119I, BstBI, Csp45I, FspII, MlaI, NspV, SspRFI | |
| AcpII | 23 | Acidiphilium cryptum 25H |
5' CCAN 5 TGG 3' GGTN 5 ACC
|
5' ---CCANNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AccB7I, Asp10HII, BasI, Esp1396I, PflBI, PflMI, Van91I | |
| AcrII | 25 | Anabaenopsis circularis |
5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AspAI, Bse64I, BseT9I, BstEII, BstPI, Eco91I, EcoO65I, PspEI | |
| AcsI | 2184 | Arthrobacter citreus 310 |
5' RAATTY 3' YTTAAR
|
5' ---R AATTY--- 3' 3' ---YTTAA R--- 5'
|
ApoI, CfaI, FsiI, XapI | |
| AcuI | 5534 | Acinetobacter calcoaceticus |
5' CTGAAG 3' GACTTC
|
5' ---CTGAAGN 13 NNN --- 3' 3' ---GACTTCN 13 N NN--- 5'
|
BspKT5I, Eco57I | |
| AcvI | 5359 | Aeromonas caviae |
5' CACGTG 3' GTGCAC
|
5' ---CAC GTG--- 3' 3' ---GTG CAC--- 5'
|
BbrPI, BcoAI, Eco72I, PmaCI, PmlI, PspCI | |
| Acyl | 31 | Anabaena cylindrica |
5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AhaII, AosII, BbiII, BsaHI, BstACI, Hin1I, HgiI, Hsp92I, Msp17I | |
| AdeI | 2991 | Alcaligenes denitrificans Ss 3-028 |
5' CACNNNGTG 3' GTGNNNCAC
|
5' ---CACNNN GTG--- 3' 3' ---GTG NNNCAC--- 5'
|
BstIZ316I, DraIII | |
| AeuI | 33 | Achromobacter eurydice |
5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
AglI, AjnI , BseBI, BstNI, BstOI, Bst2UI, EcoRII , SleI , SspAI | |
| AfaI | 37 | Acidiphilium facilis 28H |
5' GTAC 3' CATG
|
5' ---GT AC--- 3' 3' ---CA TG--- 5'
|
Csp6I , CviQI , CviRII , HpyBI, PabI , PlaAII, RsaI, RsaNI | |
| Afa16RI | 34 | Acidiphilium sp. 16R |
5' CGATCG 3' GCTAGC
|
5' ---CGAT CG--- 3' 3' ---GC TAGC--- 5'
|
Afa22MI, BspCI, EagBI, MvrI, NblI, Ple19I, PvuI, Psu161I, RshI, XorII | |
| Afa22MI | 35 | Acidocella facilis |
5' CGATCG 3' GCTAGC
|
5' ---CGAT CG--- 3' 3' ---GC TAGC--- 5'
|
Afa16RI, BspCI, EagBI, ErhB9I, NblI, Ple19I, Psu161I, PvuI, RshI | |
| AfeI | 2669 | Alcaligenes faecalis T2774 |
5' AGCGCT 3' TCGCGA
|
5' ---AGC GCT--- 3' 3' ---TCG CGA--- 5'
|
AitI, Aor51H, Eco47III, FunI | |
| AfiI | 10489 | Anoxybacillus flavithermus |
5' CCN 7 GG 3' GGN 7 CC
|
5' ---CCNNNNN NNGG--- 3' 3' ---GGNN NNNNNCC--- 5'
|
Bsc4I, BseLI, BslI, BflI, Bsc107I, BsiYI, Bst22I | |
| AflI | Anabaena flos-aquae |
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Asp745I, BamNI, BcuAI, CauI, Csp68KI, DsaIV, Eco47I, SinI | ||
| AflII | 39 | Anabaena flos-aquae |
5' CTAAG 3' GAATTC
|
5' ---C TTAAG--- 3' 3' ---GAATT C--- 5'
|
BfrI, BspTI, Bst98I, BstAFI, BstPZ740I, Esp4I, MspCI, Vha464I | |
| AflIII | 40 | Anabaena flos-aquae |
5' ACRYGT 3' TGYRCA
|
5' ---A CRYGT--- 3' 3' ---TGYRC A--- 5'
|
Asp90I | |
| AgeI | 42 | Agrobacterium gelatinovorum |
5' ACCGGT 3' TGGCCA
|
5' ---A CCGGT--- 3' 3' ---TGGCC A--- 5'
|
AsiAI, AsiGI, BshTI, CsiAI, CspAI, PinAI | |
| AglI | 6652 | Arthrobacter globiformis |
5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
AeuI, Bse16I, Bse17I, Bse24I, BshGI, EcoRII , SleI , SniI, SslI | |
| AgsI | Agrococcus sp. 25 |
5' TTSAA 3' AASTT
|
5' ---TTS AA--- 3' 5' ---AA STT--- 3'
|
Inga den 4 maj 2019 | ||
| AhaI | 45 | Alteromonas haloplanktis B8 |
5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
AseII, BcnI, BpuMI, CauII, Eco1831I , EcoHI , HgiS22I, NciI | |
| AhaII | Aphanothece halophytica |
5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AstWI, AsuIII, BsaHI, BstACI, Hin1I, HgiI, HgiDI, HgiHII, PamII | ||
| AhaIII | Aphanothece halophytica |
5' TTTAAA 3' AAATTT
|
5' ---TTT AAA--- 3' 3' ---AAA TTT--- 5'
|
DraI, PauAII, SruI | ||
| AhaB8I | Aphanothece halophytica B8 |
5' GGTACC 3' CCATGG
|
5' ---G GTACC--- 3' 3' ---CCATG G--- 5'
|
Acc65I, Asp718I, Kpnl , SthI | ||
| AhdI | Aeromonas hydrophila |
5' GACN 5 GTC 3' CTGN 5 CAG
|
5' ---GACNNN NNGTC--- 3' 3' ---CTGNN NNNCAG--- 5'
|
AspEI, BmeRI, BspOVI, DriI, Eam1105I, EclHKI, NruGI | ||
| AhlI | 4838 | Alteromonas haloplanktis SP |
5' ACTAGT 3' TGATCA
|
5' ---A CTAGT--- 3' 3' ---TGATC A--- 5'
|
AclNI, Bcul, Spel | |
| AhyI | 49 | Aeromonas hydrophila |
5' CCCGGG 3' GGGCCC
|
5' ---C CCGGG--- 3' 3' ---GGGCC C--- 5'
|
Cfr9I, CfrJ4I , EaeAI, EclRI, PaeBI , SmaI , TspMI, XmaI, XmaCI | |
| AitI | 54 | Aquaspirillum itersonii |
5' AGCGCT 3' TCGCGA
|
5' ---AGC GCT--- 3' 3' ---TCG CGA--- 5'
|
AfeI, Aor51H, Eco47III, FunI | |
| AjiI | 10919 | Acinetobacter johnsonii RFL47 |
5' CACGTC 3' GTGCAG
|
5' ---CAC GTC--- 3' 3' ---GTG CAG--- 5'
|
BmgBI, BtrI | |
| AjnI | 7185 | Acinetobacter johnsonii R2 |
5' CCWGG 3' GGWCC
|
5' --- CCWGG--- 3' 3' ---GGWCC --- 5'
|
AorI , ApaORI , ApyI , EcoRII , MvaI , Psp6I, PspGI, SleI, SspAI | |
| AjoI | 2604 | Acinetobacter johnsonii 35 |
5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
ApiI, BloHII, BspMAI, CfrA4I, CfuII, PstI, SalPI, SflI, Srl5DI | |
| AjuI | 7740 | Acinetobacter junii RFL46 |
5' GAAN 7 TTGG 3'CTTN 7 AACC
|
5' ---NNNNNN NN 6 GAAN 7 TTGGN 5 NNNNNN --- 3' 3' --- NNNNNNN 6 CTTN 7 AACCN 5 N NNNNN--- 5'
|
Inga den 28 oktober 2020 | |
| AleI | 5791 | Aureobacterium liquefaciens |
5' CACN 4 GTG 3' GTGN 4 CAC
|
5' ---CACNN NNGTG--- 3' 3' ---GTGNN NNCAC--- 5'
|
OliI | |
| AlfI | 6110 | Acinetobacter lwoffii BH 32 |
5' GCAN 6 TGC 3' CGTN 6 ACG
|
5' ---GCAN 6 TGCN 9 NNN --- 3' 3' ---CGTN 6 ACGN 9 N NN--- 5'
|
Inga i maj 2010 | |
| AliI | Acetobacter liquefaciens |
5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
AccEBI, BamHI , Bce751I, Bsp98I, BspAAIII, Nsp29132II, Pfl8I | ||
| AliAJI | 59 | Acetobacter liquefaciens AJ 2881 |
5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
ApiI, Asp713I, BspMAI, CflI, CstI, MhaAI, PstI, SalPI, Sst12I, YenI | |
| AloI | 2812 | Acinetobacter lwoffii Ks 4-8 |
5' GAACN 6 TCC 3' CTTGN 6 AGG
|
5' ---GAACN 6 TCCN 6 NNNNNN --- 3' 3' ---CTTGN 6 AGGN 6 N NNNNN--- 5'
|
Inga i maj 2010 | |
| AluI | 61 | Arthrobacter luteus |
5' AGCT 3' TCGA
|
5' ---AG CT--- 3' 3' ---TC GA--- 5'
|
AluBI, MltI | |
| AluBI | 16189 | Arthrobacter luteus B |
5' AGCT 3' TCGA
|
5' ---AG CT--- 3' 3' ---TC GA--- 5'
|
AluI, MltI | |
| Alltid | 65 | Acinetobacter lwoffii |
5' GGATC 3' CCTAG
|
5' ---GGATCN 3 N N--- 3' 3' ---CCTAGN 3 NN --- 5'
|
AclWI, BinI, BspPI, BsrWI, BstH9I, BthII, Bth617I, EacI | |
| Alw21I | Acinetobacter lwoffii RFL21 |
5' GWGCWC 3' CWCGWG
|
5' ---GWGCW C--- 3' 3' ---C WCGWG--- 5'
|
AspHI, Bbv12I, Bsh45I, BsiHKAI, Bsm6I, HgiAI, MspV281I | ||
| Alw26I | 63 | Acinetobacter lwoffii RFL26 |
5' GTCTC 3' CAGAG
|
5' ---GTCTCN NNNN--- 3' 3' ---CAGAGNNNNN --- 5'
|
BcoDI, BscQII, BsmAI, BsoMAI, BstMAI | |
| Alw44I | Acinetobacter lwoffii RFL44 |
5' GTGCAC 3' CACGTG
|
5' ---G TGCAC--- 3' 3' ---CACGT G--- 5'
|
ApaLI, SnoI, VneI | ||
| AlwNI | Acinetobacter lwoffii N |
5' CAGNNNCTG 3' GTCNNNGAC
|
5' ---CAGNNN CTG--- 3' 3' ---GTC NNNGAC--- 5'
|
CaiI | ||
| AlwXI | 67 | Acinetobacter lwoffii X |
5' GCAGC 3' CGTCG
|
5' ---GCAGCN 7 N NNNN--- 3' 3' ---CGTCGN 7 NNNNN --- 5'
|
BbvI, BseKI, BseXI, Bsp423I, Bst12I, Bst71I, BstV1I | |
| Ama87I | Alteromonas macleodii 87 |
5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
AquI, AvaI, BmeT110I, BsiHKCI, BsoBI, Eco88I, Nli3877I , NspSAI | ||
| AmaCSI | 26714 | Arthrospira maxima CS-328 |
5' GCTCCA 3' CGAGGT
|
5' ---GCTCCAN 8 NNN --- 3' 3' ---CGAGGTN 8 N NN--- 5'
|
Inga den 4 maj 2018 | |
| AocI | 74 | Anabaena sp. |
5' CCTNAGG 3' GGANTCC
|
5' ---CC TNAGG--- 3' 3' ---GGANT CC--- 5'
|
AyI, Bse21I, Bsu36I, Eco81I, Lmu60I, OaNI, MstII, SauI, SshAI | |
| AocII | Anabaena sp. |
5' GDGCHC 3' CHCGDG
|
5' ---GDGCH C--- 3' 3' ---C HCGDG--- 5'
|
BmyI, BsoCI, Bsp1286I, BspLS2I, MhlI, NspII, SduI | ||
| AorI | 77 | Acetobacter aceti orleanensis |
5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
BseBI, BstNI, BstOI, Bst2UI, EcoRII , MvaI, Sth117I, Tai | |
| Aor13HI | Acidiphilium organovorum 13H |
5' TCCGGA 3' AGGCCT
|
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5'
|
AccIII, BbvAIII, BlfI, BseAI, BsiMI, BspEI, CauB3I, Kpn2I, MroI, PtaI | ||
| Aor51HI | 76 | Acidiphilium organovorum 51H |
5' AGCGCT 3' TCGCGA
|
5' ---AGC GCT--- 3' 3' ---TCG CGA--- 5'
|
AfeI, AitI, Eco47III, FunI | |
| AosI | Anabaena oscillarioides |
5' TGCGCA 3' ACGCGT
|
5' ---TGC GCA--- 3' 3' ---ACG CGT--- 5'
|
Acc16I, AviII, FdII, FspI, MstI, NsbI, PamI, Pun14627I | ||
| AosII | Anabaena oscillarioides |
5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AstWI, BbiII, BsaHI, BstACI, Hin1I, HgiI, HgiGI, Msp17I, PamII | ||
| ApaI | Acetobacter pasteurianus pasteurianus |
5' GGGCCC 3' CCCGGG
|
5' ---GGGCC C--- 3' 3' ---C CCGGG--- 5'
|
Bsp120I, Ppel, PspOMI | ||
| ApaBI | Acetobacter pasteurianus B |
5' GCAN 5 TGC 3' CGTN 5 ACG
|
5' ---GCANNNNN TGC--- 3' 3' ---CGT NNNNNACG--- 5'
|
BstAPI | ||
| ApaCI | Acetobacter pasteurianus C |
5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
AliI, BamHI , BnaI, Bsp4009I, BstI, NspSAIV, Pfl8I, SolI, SurI | ||
| ApaLI | Acetobacter pasteurianus |
5' GTGCAC 3' CACGTG
|
5' ---G TGCAC--- 3' 3' ---CACGT G--- 5'
|
Alw44I, SnoI, VneI | ||
| ApaORI | 86 | Acetobacter pasteurianus |
5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
AjnI , BstNI, BstOI, Bst1I, Bst2I, Fsp1604I, MvaI, Psp6I , PspGI | |
| ApeKI | Aeropyrum pernix K1 |
5' GCWGC 3' CGWCG
|
5' ---G CWGC--- 3' 3' ---CGWC G--- 5'
|
AceI, SuiI, Taq52I, Tsel | ||
| ApiI | 2315 | Arthrobacter picolinophilus |
5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
Asp713I, Bsp63I, CfrA4I, PaePI, Pfl21I, Psp23I, PstI, SflI, Sst12I | |
| ApoI | Arthrobacter protophormiae |
5' RAATTY 3' YTTAAR
|
5' ---R AATTY--- 3' 3' ---YTTAA R--- 5'
|
AcsI, CfaI, FsiI, XapI, EcoRI | ||
| AplI | 25962 | Arthrospira platensis NIES-39 |
5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
Se denna webbplats för en komplett lista. | |
| ApyI | 93 | Arthrobacter pyridinolis |
5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
BciBII, BptI, BseBI, BstNI, BstOI, Bst2UI, Bst38I, Bst100I, MvaI | |
| APIPI | 14756 | Arcanobacterium pyogenes |
5' ATCGAC 3' TAGCTG
|
5' ---ATCGACN 17 NNN --- 3' 3' ---TAGCTGN 17 N NN--- 5'
|
Inga den 4 augusti 2019 | |
| AquI | Agmenellum quadruplicatum PR-6 |
5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
BcoI, BmeT110I, BsmAI, BsoMAI, BsoBI, BstSI, Eco27kI, OfoI | ||
| AquII | 20238 | Agmenellum quadruplicatum PR-6 |
5' GCCGNAC 3' CGGCNTG
|
5' ---GCCGNACN 17 NNN --- 3' 3' ---CGGCNTGN 17 N NN--- 5'
|
Inga den 4 augusti 2019 | |
| AquIII | 20239 | Agmenellum quadruplicatum PR-6 |
5' GAGGAG 3' CTCCTC
|
5' ---GAGGAGN 17 NNN --- 3' 3' ---CTCCTCN 17 N NN--- 5'
|
BseRI | |
| AquIV | 20240 | Agmenellum quadruplicatum PR-6 |
5' GRGGAAG 3' CYCCTTC
|
5' ---GRGGAAGN 16 NNN --- 3' 3' ---CYCCTTCN 16 N NN--- 5'
|
Inga per 4/9/19 | |
| ArsI | 19405 | Arthrobacter sp. NTS |
5' GACN 6 TTYG 3' CTGN 6 AARC
|
5' ---NNNNNN NN 7 GACN 6 TTYGN 5 NNNNNN --- 3' 3' --- NNNNNNN 7 CTGN 6 AARCN 5 N NNNNN--- 5'
|
Inga den 28 oktober 2020 | |
| AscI | Arthrobacter sp. |
5' GGCGCGCC 3' CCGCGCGG
|
5' ---GG CGCGCC--- 3' 3' ---CCGCGC GG--- 5'
|
PalAI, SgsI | ||
| AseI | 96 | Aquaspirillum serpens |
5' ATTAAT 3' TAATTA
|
5' ---AT TAAT--- 3' 3' ---TAAT TA--- 5'
|
AsnI, BpoAI, PshBI, Sru4DI, VspI | |
| AseII | 97 | Aquaspirillum serpens |
5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
Ahal, AsuC2I, BcnI, CauII, EcoHI , HgiS22I, Kpn49kII , Mgl14481I, NciI | |
| AsiI | Azotobacter sp. |
5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
ApaCI, BamHI , BnaI, Bsp4009I, BstI, OkrAI, Pfl8I, SurI, Uba4009I | ||
| AsiaAI | 2853 | Arthrobacter sp. A7359 |
5' ACCGGT 3' TGGCCA
|
5' ---A CCGGT--- 3' 3' ---TGGCC A--- 5'
|
AgeI, AsiGI, BshTI, CsiAI, CspAI, PinAI | |
| AsiGI | 10828 | Arthrobacter sp. G |
5' ACCGGT 3' TGGCCA
|
5' ---A CCGGT--- 3' 3' ---TGGCC A--- 5'
|
AgeI, AsiAI, BshTI, CsiAI, CspAI, PinAI | |
| AsiSI | Arthrobacter sp. |
5' GCGATCGC 3' CGCTAGCG
|
5' ---GCGAT CGC--- 3' 3' ---CGC TAGCG--- 5'
|
RgaI, SfaAI, , SgfI | ||
| Asi256I | 18472 | Arthrobacter sp. Ck256 |
5' GATC 3' CTAG
|
5' ---G ATC--- 3' 3' ---CTA G--- 5'
|
Se denna webbplats för en komplett lista. | |
| Asi372I | 15803 | Arthrobacter sp. Mn372 |
5' ATGCAT 3' TACGTA
|
5' ---ATGCA T--- 3' 3' ---T ACGTA--- 5'
|
Ppu10I , EcoT22I, Mph1103I, NsiI, Zsp2I, BfrBI, Csp68KIII, PinBI, SepI, SspD5II | |
| AsnI | 98 | Arthrobacter sp. N-CM |
5' ATTAAT 3' TAATTA
|
5' ---AT TAAT--- 3' 3' ---TAAT TA--- 5'
|
AseI, BpoAI, PshBI, Sru4DI, VspI | |
| AspI | Achromobacter sp. 699 |
5' GACNNNGTC 3' CTGNNNCAG
|
5' ---GACN NNGTC--- 3' 3' ---CTGNN NCAG--- 5'
|
AtsI, PflFI, PsyI, TelI, Tth111I | ||
| Asp10HI | Acidiphilium sp. 10H |
5' TTCGAA 3' AAGCTT
|
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5'
|
AsuII, BspT104I, BstBI, CbiI, Csp68KII, PlaII, PpaAI, Ssp1I | ||
| Asp10HII | 100 | Acidiphilium sp. 10H |
5' CCAN 5 TGG 3' GGTN 5 ACC
|
5' ---CCANNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AccB7I, AcpII, BasI, Esp1396I, PflBI, PflMI, Van91I | |
| Asp26HI | 111 | Acidiphilium sp. 26H |
5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp27HI, Asp35HI, Asp36HI, BsaMI, BscCI, BsmI, PctI | |
| Asp27HI | 112 | Acidiphilium sp. 27H |
5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp35HI, Asp36HI, Asp40HI, BmaHI, BsaMI, BscCI, BsmI | |
| Asp35HI | 117 | Acidiphilium sp. 35H |
5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp36HI, Asp40HI, Asp50HI, BsaMI, BscCI, BsmI, Mva1269I | |
| Asp36HI | 118 | Acidiphilium sp. 36H |
5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp40HI, Asp50HI, BmaHI, BscCI, BsmI, Mva1269I, PctI | |
| Asp40HI | 120 | Acidiphilium sp. 40H |
5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp27HI, Asp36HI, Asp50HI, BsaMI, BscCI, BsmI, Mva1269I | |
| Asp50HI | 122 | Acidiphilium sp. 50H |
5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp26HI, Asp35HI, Asp36HI, BsaMI, BscCI, BsmI, Mva1269I | |
| Asp700I | Achromobacter sp. 700 |
5' GAAN 4 TTC 3' CTTN 4 AAG
|
5' ---GAANN NNTTC--- 3' 3' ---CTTNN NNAAG--- 5'
|
BbvAI, MroXI, Pdml, XmnI | ||
| Asp713I | 131 | Achromobacter sp. 713 |
5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
AjoI, AliAJI, BloHII, CfrA4I, Ecl37kI, MhaAI, PstI, SflI, Srl5DI, YenI | |
| Asp718I | Achromobacter sp. 718 |
5' GGTACC 3' CCATGG
|
5' ---G GTACC--- 3' 3' ---CCATG G--- 5'
|
Acc65I, AhaB8I, KpnI , SthI | ||
| Asp745I | Achromobacter sp. 745 |
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BsrAI, Caul, Eco47I, ErpI, FdiI, SinI, VpaK11AI , VpaK11BI | ||
| AspAI | Alcaligenes sp. |
5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AcrII, Bse64I, BseT10I, BstEII, BstPI, Eco91I, EcoO65I, PspEI | ||
| AspA2I | 6959 | Arthrobacter sp. A2 |
5' CCTAGG 3' GGATCC
|
5' ---C CTAGG--- 3' 3' ---GGATC C--- 5'
|
AvrBII, AvrII, BlnI, BspA2I, XmaJI | |
| AspEI | Aureobacterium sp. |
5' GACN 5 GTC 3' CTGN 5 CAG
|
5' ---GACNNN NNGTC--- 3' 3' ---CTGNN NNNCAG--- 5'
|
AhdI, BmeRI, BspOVI, DriI, Eam1105I, EclHKI, NruGI | ||
| AspHI | Achromobacter sp. H |
5' GWGCWC 3' CWCGWG
|
5' ---GWGCW C--- 3' 3' ---C WCGWG--- 5'
|
Alw21I, Bbv12I, Bsh45I, BsiHKAI, Bsm6I, HgiAI, MspV281I | ||
| AspLEI | Arthrobacter sp. LE3860 |
5' GCGC 3' CGCG
|
5' ---GCG C--- 3' 3' ---C GCG--- 5'
|
BspLAI, BstHHI, CfoI, FnuDIII, Hhal, Hin6I , HinP1I , HsoI , HspAI , SciNI | ||
| AspMI | 2977 | Acinetobacter sp. M |
5' AGGCCT 3' TCCGGA
|
5' ---AGG CCT--- 3' 3' ---TCC GGA--- 5'
|
AatI, Eco147I, GdiI, Pcel, SarI, Sru30DI, SseBI, SteI, StuI | |
| AspMDI | Alcaligenes sp. MD1 |
5' GATC 3' CTAG
|
5' --- GATC--- 3' 3' ---CTAG --- 5'
|
BfuCI, Bsp143I, BstMBI, DpnII, Kzo9I, MboI, NdeII, Sau3AI | ||
| AspNI | Anabaena sp. J 3 |
5' GGNNCC 3' CCNNGG
|
5' ---GGN NCC--- 3' 3' ---CCN NGG--- 5'
|
BmiI, BscBI, BspLI, NlaIV, PspN4I | ||
| AspS9I | Arthrobacter sp. S9 |
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AsuI, AvcI, Bac36I, Bal228I, FmuI , NspIV, PspPI, Sau96I | ||
| AssI | 4930 | Arthrobacter sp. |
5' AGTACT 3' TCATGA
|
5' ---AGT ACT--- 3' 3' ---TCA TGA--- 5'
|
Acc113I, BmcAI, Bpa34I, DpaI, Eco255I, RflFII, ScaI, ZrmI | |
| AstWI | Anabaena sp. |
5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BsaHI, BstACI, Hin1I, HgiI, HgiDI, HgiGI, Msp17I | ||
| AsuI | Anabaena subcylindrica |
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, Avcl, CcuI, Cfr13I, Fmul , MaeK81II, Nsp7121I, PspPI, UnbI | ||
| AsuII | Anabaena subcylindrica |
5' TTCGAA 3' AAGCTT
|
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5'
|
Acpl, Bpu14I, Bsp119I, BspT104I, Csp45I, FspII, LspI, NspV, SfuI | ||
| AsuIII | Anabaena subcylindrica |
5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
Acyl, AsuIII, BbiII, BsaHI, BstACI, Hin1I, HgiHII, Hsp92I, Msp17I | ||
| AsuC2I | 2901 | Actinobacillus suis C2 |
5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
Ahal, AseII, BcnI, Eco1831I , EcoHI , Kpn49kII , Mgl14481I, NciI | |
| AsuHPI | 2811 | Actinobacillus suis HP |
5' GGTGA 3' CCACT
|
5' ---GGTGAN 6 NN --- 3' 3' ---CCACTN 6 N N--- 5'
|
HphI, SspD5I | |
| AsuNHI | Actinobacillus suis NH |
5' GCTAGC 3' CGATCG
|
5' ---G CTAGC--- 3' 3' ---CGATC G--- 5'
|
AceII , BmtI , BspOI, LlaG2I, Nhel, PstNHI | ||
| AtsI | Aureobacterium testaceum 4842 |
5' GACNNNGTC 3' CTGNNNCAG
|
5' ---GACN NNGTC--- 3' 3' ---CTGNN NCAG--- 5'
|
AspI, PflFI, PsyI, TelI, Tth111I | ||
| AvaI | Anabaena variabilis |
5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
AquI, Ama87I, BsiHKCI, BsoBI, BspLU4I, Eco88I, NspIII, PlaAI | ||
| AvaII | Anabaena variabilis |
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, Bme216I, BsrAI, Eco47I, Kzo49I, Psp03I , SmuEI, VpaK11AI | ||
| Avcl | Actinomyces violaceoniger cristalomycini |
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, BshKI, BsiZI, Bsp1894I, BspBII, BspF4I, Bsu54I, Pde12I | ||
| AviII | Anabaena variabillis (halle) |
5' TGCGCA 3' ACGCGT
|
5' ---TGC GCA--- 3' 3' ---ACG CGT--- 5'
|
Acc16I, AosI, FdII, FspI, MstI, NsbI, PamI, Pun14627I | ||
| AvrII | 173 | Anabaena variabilis UW |
5' CCTAGG 3' GGATCC
|
5' ---C CTAGG--- 3' 3' ---GGATC C--- 5'
|
AspA2I, AvrBII, BlnI, BspA2I, XmaJI | |
| AvrBII | 171 | Arthrobacter variabilis |
5' CCTAGG 3' GGATCC
|
5' ---C CTAGG--- 3' 3' ---GGATC C--- 5'
|
AspA2I, AvrII, BlnI, BspA2I, XmaJI | |
| AxyI | 174 | Acetobacter xylinus |
5' CCTNAGG 3' GGANTCC
|
5' ---CC TNAGG--- 3' 3' ---GGANT CC--- 5'
|
AocI, BliHKI, Bse21I, BspR7I, Bsu36I, CvnI, Eco81I, Lmu60I |
§ En HF-version av detta enzym finns tillgänglig